private static final int MAX_UNCHANGED_LENGTH = 0x1000;
private static final int MAX_UNCHANGED = MAX_UNCHANGED_LENGTH - 1;
- // 0wwwcccccccccccc with w=1..6 records ccc+1 replacements of w:w text units.
- // No length change.
- private static final int MAX_SHORT_WIDTH = 6;
- private static final int MAX_SHORT_CHANGE_LENGTH = 0xfff;
+ // 0mmmnnnccccccccc with m=1..6 records ccc+1 replacements of m:n text units.
+ private static final int MAX_SHORT_CHANGE_OLD_LENGTH = 6;
+ private static final int MAX_SHORT_CHANGE_NEW_LENGTH = 7;
+ private static final int SHORT_CHANGE_NUM_MASK = 0x1ff;
private static final int MAX_SHORT_CHANGE = 0x6fff;
// 0111mmmmmmnnnnnn records a replacement of m text units with n.
* @provisional This API might change or be removed in a future release.
*/
public void addReplace(int oldLength, int newLength) {
- if(oldLength == newLength && 0 < oldLength && oldLength <= MAX_SHORT_WIDTH) {
- // Replacement of short oldLength text units by same-length new text.
- // Merge into previous short-replacement record, if any.
- ++numChanges;
- int last = lastUnit();
- if(MAX_UNCHANGED < last && last < MAX_SHORT_CHANGE &&
- (last >> 12) == oldLength && (last & 0xfff) < MAX_SHORT_CHANGE_LENGTH) {
- setLastUnit(last + 1);
- return;
- }
- append(oldLength << 12);
- return;
- }
-
if(oldLength < 0 || newLength < 0) {
throw new IllegalArgumentException(
"addReplace(" + oldLength + ", " + newLength +
delta += newDelta;
}
+ if(0 < oldLength && oldLength <= MAX_SHORT_CHANGE_OLD_LENGTH &&
+ newLength <= MAX_SHORT_CHANGE_NEW_LENGTH) {
+ // Merge into previous same-lengths short-replacement record, if any.
+ int u = (oldLength << 12) | (newLength << 9);
+ int last = lastUnit();
+ if(MAX_UNCHANGED < last && last < MAX_SHORT_CHANGE &&
+ (last & ~SHORT_CHANGE_NUM_MASK) == u &&
+ (last & SHORT_CHANGE_NUM_MASK) < SHORT_CHANGE_NUM_MASK) {
+ setLastUnit(last + 1);
+ return;
+ }
+ append(u);
+ return;
+ }
+
int head = 0x7000;
if (oldLength < LENGTH_IN_1TRAIL && newLength < LENGTH_IN_1TRAIL) {
head |= oldLength << 6;
private final char[] array;
private int index;
private final int length;
+ /**
+ * 0 if we are not within compressed equal-length changes.
+ * Otherwise the number of remaining changes, including the current one.
+ */
private int remaining;
private final boolean onlyChanges_, coarse;
+ private int dir; // iteration direction: back(<0), initial(0), forward(>0)
private boolean changed;
private int oldLength_, newLength_;
private int srcIndex, replIndex, destIndex;
}
}
- private void updateIndexes() {
+ private void updateNextIndexes() {
srcIndex += oldLength_;
if (changed) {
replIndex += newLength_;
destIndex += newLength_;
}
+ private void updatePreviousIndexes() {
+ srcIndex -= oldLength_;
+ if (changed) {
+ replIndex -= newLength_;
+ }
+ destIndex -= newLength_;
+ }
+
private boolean noNext() {
- // No change beyond the string.
+ // No change before or beyond the string.
+ dir = 0;
changed = false;
oldLength_ = newLength_ = 0;
return false;
}
private boolean next(boolean onlyChanges) {
- // We have an errorCode in case we need to start guarding against integer overflows.
- // It is also convenient for caller loops if we bail out when an error was set elsewhere.
- updateIndexes();
- if (remaining > 0) {
- // Fine-grained iterator: Continue a sequence of equal-length changes.
- --remaining;
- return true;
+ // Forward iteration: Update the string indexes to the limit of the current span,
+ // and post-increment-read array units to assemble a new span.
+ // Leaves the array index one after the last unit of that span.
+ if (dir > 0) {
+ updateNextIndexes();
+ } else {
+ if (dir < 0) {
+ // Turn around from previous() to next().
+ // Post-increment-read the same span again.
+ if (remaining > 0) {
+ // Fine-grained iterator:
+ // Stay on the current one of a sequence of compressed changes.
+ ++index; // next() rests on the index after the sequence unit.
+ dir = 1;
+ return true;
+ }
+ }
+ dir = 1;
+ }
+ if (remaining >= 1) {
+ // Fine-grained iterator: Continue a sequence of compressed changes.
+ if (remaining > 1) {
+ --remaining;
+ return true;
+ }
+ remaining = 0;
}
if (index >= length) {
return noNext();
}
newLength_ = oldLength_;
if (onlyChanges) {
- updateIndexes();
+ updateNextIndexes();
if (index >= length) {
return noNext();
}
}
changed = true;
if (u <= MAX_SHORT_CHANGE) {
+ int oldLen = u >> 12;
+ int newLen = (u >> 9) & MAX_SHORT_CHANGE_NEW_LENGTH;
+ int num = (u & SHORT_CHANGE_NUM_MASK) + 1;
if (coarse) {
- int w = u >> 12;
- int len = (u & 0xfff) + 1;
- oldLength_ = newLength_ = len * w;
+ oldLength_ = num * oldLen;
+ newLength_ = num * newLen;
} else {
- // Split a sequence of equal-length changes that was compressed into one unit.
- oldLength_ = newLength_ = u >> 12;
- remaining = u & 0xfff;
+ // Split a sequence of changes that was compressed into one unit.
+ oldLength_ = oldLen;
+ newLength_ = newLen;
+ if (num > 1) {
+ remaining = num; // This is the first of two or more changes.
+ }
return true;
}
} else {
while (index < length && (u = array[index]) > MAX_UNCHANGED) {
++index;
if (u <= MAX_SHORT_CHANGE) {
- int w = u >> 12;
- int len = (u & 0xfff) + 1;
- len = len * w;
- oldLength_ += len;
- newLength_ += len;
+ int num = (u & SHORT_CHANGE_NUM_MASK) + 1;
+ oldLength_ += (u >> 12) * num;
+ newLength_ += ((u >> 9) & MAX_SHORT_CHANGE_NEW_LENGTH) * num;
} else {
assert(u <= 0x7fff);
- int oldLen = readLength((u >> 6) & 0x3f);
- int newLen = readLength(u & 0x3f);
- oldLength_ += oldLen;
- newLength_ += newLen;
+ oldLength_ += readLength((u >> 6) & 0x3f);
+ newLength_ += readLength(u & 0x3f);
+ }
+ }
+ return true;
+ }
+
+ private boolean previous() {
+ // Backward iteration: Pre-decrement-read array units to assemble a new span,
+ // then update the string indexes to the start of that span.
+ // Leaves the array index on the head unit of that span.
+ if (dir >= 0) {
+ if (dir > 0) {
+ // Turn around from next() to previous().
+ // Set the string indexes to the span limit and
+ // pre-decrement-read the same span again.
+ if (remaining > 0) {
+ // Fine-grained iterator:
+ // Stay on the current one of a sequence of compressed changes.
+ --index; // previous() rests on the sequence unit.
+ dir = -1;
+ return true;
+ }
+ updateNextIndexes();
}
+ dir = -1;
}
+ if (remaining > 0) {
+ // Fine-grained iterator: Continue a sequence of compressed changes.
+ int u = array[index];
+ assert(MAX_UNCHANGED < u && u <= MAX_SHORT_CHANGE);
+ if (remaining <= (u & SHORT_CHANGE_NUM_MASK)) {
+ ++remaining;
+ updatePreviousIndexes();
+ return true;
+ }
+ remaining = 0;
+ }
+ if (index <= 0) {
+ return noNext();
+ }
+ int u = array[--index];
+ if (u <= MAX_UNCHANGED) {
+ // Combine adjacent unchanged ranges.
+ changed = false;
+ oldLength_ = u + 1;
+ while (index > 0 && (u = array[index - 1]) <= MAX_UNCHANGED) {
+ --index;
+ oldLength_ += u + 1;
+ }
+ newLength_ = oldLength_;
+ // No need to handle onlyChanges as long as previous() is called only from findIndex().
+ updatePreviousIndexes();
+ return true;
+ }
+ changed = true;
+ if (u <= MAX_SHORT_CHANGE) {
+ int oldLen = u >> 12;
+ int newLen = (u >> 9) & MAX_SHORT_CHANGE_NEW_LENGTH;
+ int num = (u & SHORT_CHANGE_NUM_MASK) + 1;
+ if (coarse) {
+ oldLength_ = num * oldLen;
+ newLength_ = num * newLen;
+ } else {
+ // Split a sequence of changes that was compressed into one unit.
+ oldLength_ = oldLen;
+ newLength_ = newLen;
+ if (num > 1) {
+ remaining = 1; // This is the last of two or more changes.
+ }
+ updatePreviousIndexes();
+ return true;
+ }
+ } else {
+ if (u <= 0x7fff) {
+ // The change is encoded in u alone.
+ oldLength_ = readLength((u >> 6) & 0x3f);
+ newLength_ = readLength(u & 0x3f);
+ } else {
+ // Back up to the head of the change, read the lengths,
+ // and reset the index to the head again.
+ assert(index > 0);
+ while ((u = array[--index]) > 0x7fff) {}
+ assert(u > MAX_SHORT_CHANGE);
+ int headIndex = index++;
+ oldLength_ = readLength((u >> 6) & 0x3f);
+ newLength_ = readLength(u & 0x3f);
+ index = headIndex;
+ }
+ if (!coarse) {
+ updatePreviousIndexes();
+ return true;
+ }
+ }
+ // Combine adjacent changes.
+ while (index > 0 && (u = array[index - 1]) > MAX_UNCHANGED) {
+ --index;
+ if (u <= MAX_SHORT_CHANGE) {
+ int num = (u & SHORT_CHANGE_NUM_MASK) + 1;
+ oldLength_ += (u >> 12) * num;
+ newLength_ += ((u >> 9) & MAX_SHORT_CHANGE_NEW_LENGTH) * num;
+ } else if (u <= 0x7fff) {
+ // Read the lengths, and reset the index to the head again.
+ int headIndex = index++;
+ oldLength_ += readLength((u >> 6) & 0x3f);
+ newLength_ += readLength(u & 0x3f);
+ index = headIndex;
+ }
+ }
+ updatePreviousIndexes();
return true;
}
spanLength = newLength_;
}
if (i < spanStart) {
+ if (i >= (spanStart / 2)) {
+ // Search backwards.
+ for (;;) {
+ boolean hasPrevious = previous();
+ assert(hasPrevious); // because i>=0 and the first span starts at 0
+ spanStart = findSource ? srcIndex : destIndex;
+ if (i >= spanStart) {
+ // The index is in the current span.
+ return 0;
+ }
+ if (remaining > 0) {
+ // Is the index in one of the remaining compressed edits?
+ // spanStart is the start of the current span, first of the remaining ones.
+ spanLength = findSource ? oldLength_ : newLength_;
+ int u = array[index];
+ assert(MAX_UNCHANGED < u && u <= MAX_SHORT_CHANGE);
+ int num = (u & SHORT_CHANGE_NUM_MASK) + 1 - remaining;
+ int len = num * spanLength;
+ if (i >= (spanStart - len)) {
+ int n = ((spanStart - i - 1) / spanLength) + 1;
+ // 1 <= n <= num
+ srcIndex -= n * oldLength_;
+ replIndex -= n * newLength_;
+ destIndex -= n * newLength_;
+ remaining += n;
+ return 0;
+ }
+ // Skip all of these edits at once.
+ srcIndex -= num * oldLength_;
+ replIndex -= num * newLength_;
+ destIndex -= num * newLength_;
+ remaining = 0;
+ }
+ }
+ }
// Reset the iterator to the start.
+ dir = 0;
index = remaining = oldLength_ = newLength_ = srcIndex = replIndex = destIndex = 0;
} else if (i < (spanStart + spanLength)) {
// The index is in the current span.
// The index is in the current span.
return 0;
}
- if (remaining > 0) {
+ if (remaining > 1) {
// Is the index in one of the remaining compressed edits?
- // spanStart is the start of the current span, before the remaining ones.
- int len = (remaining + 1) * spanLength;
+ // spanStart is the start of the current span, first of the remaining ones.
+ int len = remaining * spanLength;
if (i < (spanStart + len)) {
- int n = (i - spanStart) / spanLength; // 1 <= n <= remaining
- len = n * spanLength;
- srcIndex += len;
- replIndex += len;
- destIndex += len;
+ int n = (i - spanStart) / spanLength; // 1 <= n <= remaining - 1
+ srcIndex += n * oldLength_;
+ replIndex += n * newLength_;
+ destIndex += n * newLength_;
remaining -= n;
return 0;
}
// Make next() skip all of these edits at once.
- oldLength_ = newLength_ = len;
+ oldLength_ *= remaining;
+ newLength_ *= remaining;
remaining = 0;
}
}
srcIndexes.add(srcIndex);
if (expected[i].oldLength > 1) {
srcIndexes.add(srcIndex + 1);
+ if (expected[i].oldLength > 2) {
+ srcIndexes.add(srcIndex + expected[i].oldLength - 1);
+ }
}
}
if (expected[i].newLength > 0) {
destIndexes.add(destIndex);
- if (expected[i].newLength > 0) {
+ if (expected[i].newLength > 1) {
destIndexes.add(destIndex + 1);
+ if (expected[i].newLength > 2) {
+ destIndexes.add(destIndex + expected[i].newLength - 1);
+ }
}
}
srcIndex += expected[i].oldLength;
srcIndexes.add(srcLength + 1);
destIndexes.add(destLength + 1);
Collections.reverse(destIndexes);
- for (int i : srcIndexes) {
- assertEquals(name + " destIndexFromSrc(" + i + "):",
- destIndexFromSrc(expected, srcLength, destLength, i),
- ei2.destinationIndexFromSourceIndex(i));
+ // Zig-zag across the indexes to stress next() <-> previous().
+ for (int i = 0; i < srcIndexes.size(); ++i) {
+ for (int j : ZIG_ZAG) {
+ if ((i + j) < srcIndexes.size()) {
+ int si = srcIndexes.get(i + j);
+ assertEquals(name + " destIndexFromSrc(" + si + "):",
+ destIndexFromSrc(expected, srcLength, destLength, si),
+ ei2.destinationIndexFromSourceIndex(si));
+ }
+ }
}
- for (int i : destIndexes) {
- assertEquals(name + " srcIndexFromDest(" + i + "):",
- srcIndexFromDest(expected, srcLength, destLength, i),
- ei2.sourceIndexFromDestinationIndex(i));
+ for (int i = 0; i < destIndexes.size(); ++i) {
+ for (int j : ZIG_ZAG) {
+ if ((i + j) < destIndexes.size()) {
+ int di = destIndexes.get(i + j);
+ assertEquals(name + " srcIndexFromDest(" + di + "):",
+ srcIndexFromDest(expected, srcLength, destLength, di),
+ ei2.sourceIndexFromDestinationIndex(di));
+ }
+ }
}
}
+ private static final int[] ZIG_ZAG = { 0, 1, 2, 3, 2, 1 };
+
@Test
public void TestEdits() {
Edits edits = new Edits();
assertFalse("unchanged 10003 hasChanges", edits.hasChanges());
assertEquals("unchanged 10003 numberOfChanges", 0, edits.numberOfChanges());
assertEquals("unchanged 10003", 0, edits.lengthDelta());
- edits.addReplace(1, 1); // multiple short equal-length edits are compressed
+ edits.addReplace(2, 1); // multiple short equal-lengths edits are compressed
edits.addUnchanged(0);
- edits.addReplace(1, 1);
- edits.addReplace(1, 1);
+ edits.addReplace(2, 1);
+ edits.addReplace(2, 1);
edits.addReplace(0, 10);
edits.addReplace(100, 0);
edits.addReplace(3000, 4000); // variable-length encoding
edits.addReplace(100000, 100000);
assertTrue("some edits hasChanges", edits.hasChanges());
assertEquals("some edits numberOfChanges", 7, edits.numberOfChanges());
- assertEquals("some edits", 10 - 100 + 1000, edits.lengthDelta());
+ assertEquals("some edits", -3 + 10 - 100 + 1000, edits.lengthDelta());
EditChange[] coarseExpectedChanges = new EditChange[] {
new EditChange(false, 10003, 10003),
- new EditChange(true, 103103, 104013)
+ new EditChange(true, 103106, 104013)
};
checkEditsIter("coarse",
edits.getCoarseIterator(), edits.getCoarseIterator(),
EditChange[] fineExpectedChanges = new EditChange[] {
new EditChange(false, 10003, 10003),
- new EditChange(true, 1, 1),
- new EditChange(true, 1, 1),
- new EditChange(true, 1, 1),
+ new EditChange(true, 2, 1),
+ new EditChange(true, 2, 1),
+ new EditChange(true, 2, 1),
new EditChange(true, 0, 10),
new EditChange(true, 100, 0),
new EditChange(true, 3000, 4000),
assertFalse("reset then iterator", ei.next());
}
+ @Test
+ public void TestEditsFindFwdBwd() {
+ // Some users need index mappings to be efficient when they are out of order.
+ // The most interesting failure case for this test is it taking a very long time.
+ Edits e = new Edits();
+ int N = 200000;
+ for (int i = 0; i < N; ++i) {
+ e.addUnchanged(1);
+ e.addReplace(3, 1);
+ }
+ Edits.Iterator iter = e.getFineIterator();
+ for (int i = 0; i <= N; i += 2) {
+ assertEquals("ascending", i * 2, iter.sourceIndexFromDestinationIndex(i));
+ assertEquals("ascending", i * 2 + 1, iter.sourceIndexFromDestinationIndex(i + 1));
+ }
+ for (int i = N; i >= 0; i -= 2) {
+ assertEquals("descending", i * 2 + 1, iter.sourceIndexFromDestinationIndex(i + 1));
+ assertEquals("descending", i * 2, iter.sourceIndexFromDestinationIndex(i));
+ }
+ }
+
@Test
public void TestMergeEdits() {
Edits ab = new Edits(), bc = new Edits(), ac = new Edits(), expected_ac = new Edits();